GnnX-Bench: Unravelling the Utility of Perturbation-based Gnn Explainers through In-depth Benchmarking
Abstract
Numerous explainability methods have been proposed to shed light on the inner workings of Gnns. Despite the inclusion of empirical evaluations in all the proposed algorithms, the interrogative aspects of these evaluations lack diversity. As a result, various facets of explainability pertaining to Gnns, such as, their stability to variational factors such as different Gnn architectures, noise, stochasticity in non-convex loss surfaces, feasibility amidst domain constraints, and so forth, have yet to be formally investigated. Motivated by this need, we present a benchmarking study on perturbation-based explainability methods for Gnns, aiming to systematically evaluate and compare a wide range of explainability techniques. Among the key findings of our study, we identify the Pareto-optimal methods that exhibit superior efficacy and stability in the presence of noise. Nonetheless, our study reveals that all algorithms are affected by stability issues when faced with noisy data. Furthermore, we have established that the current generation of counterfactual explainers often fails to provide feasible recourses due to violations of topological constraints encoded by domain-specific considerations. Overall, this benchmarking study empowers stakeholders in the field of Gnns with a comprehensive understanding of the state-of-the-art explainability methods, potential research problems for further enhancement, and the implications of their application in real-world scenarios. =-1
Benchmark Results
Tested on 2 datasets Non-standard metric on 2 datasets
Tables show presented results in global context (best 3 papers + GCN + MLP).
TU Dortmund
MUTAG
Global leaderboard →Default metric is Accuracy. The paper reports 0 values on Accuracy , 3 values on Suffic. , 3 values on Size and 3 values on Sparsity .
Sorted by Suffic.. Highlighted rows are from other papers.
| # | Model | Accuracy ↓ default | Suffic. ↓ | Size ↓ | Sparsity ↓ | Paper |
|---|---|---|---|---|---|---|
| 1 | RCExplainer | — | 0.4000
±
0.1200 | 1.1000
±
0.2200 | 0.9400
±
0.0100 | Accuracy
— Size
1.1000
±
0.2200 Sparsity
0.9400
±
0.0100 |
| 2 | CLEAR | — | 0.5500
±
0.1000 | 17.1500
±
1.6200 | 0.8800
±
0.0700 | Accuracy
— Size
17.1500
±
1.6200 Sparsity
0.8800
±
0.0700 |
| 3 | CF^2 (α=0) | — | 0.9000
±
0.1200 | 1.0000
±
0.0000 | — | Accuracy
— Size
1.0000
±
0.0000 Sparsity
— |
| 4 | CF^2 | — | —
| — | 0.9400
±
0.0000 | Accuracy
— Size
— Sparsity
0.9400
±
0.0000 |
OGB
ogbg-molhiv
Global leaderboard →Default metric is ROC-AUC. The paper reports 0 values on ROC-AUC , 2 values on Suffic. , 2 values on Size and 2 values on Sparsity .
Sorted by Suffic.. Highlighted rows are from other papers.
| # | Model | ROC-AUC ↓ default | Suffic. ↓ | Size ↓ | Sparsity ↓ | Paper |
|---|---|---|---|---|---|---|
| 1 | CF^2 | — | —
| — | 0.6200
±
0.0500 | ROC-AUC
— Size
— Sparsity
0.6200
±
0.0500 |
| 1 | RCExplainer | — | 0.9000
±
0.0200 | 1.0000
±
0.0000 | 0.9600
±
0.0000 | ROC-AUC
— Size
1.0000
±
0.0000 Sparsity
0.9600
±
0.0000 |
| 2 | CF^2 (α=0) | — | 0.9600
±
0.0000 | 10.4500
±
4.4300 | — | ROC-AUC
— Size
10.4500
±
4.4300 Sparsity
— |
