ICLR 2023

From Molecules to Materials: Pre-training Large Generalizable Models for Atomic Property Prediction

Nima Shoghi, Adeesh Kolluru, John R. Kitchin, Zachary W. Ulissi, C. L. Zitnick, Brandon M. Wood

Main figure for From Molecules to Materials: Pre-training Large Generalizable Models for Atomic Property Prediction

Abstract

Foundation models have been transformational in machine learning fields such as natural language processing and computer vision. Similar success in atomic property prediction has been limited due to the challenges of training effective models across multiple chemical domains. To address this, we introduce Joint Multi-domain Pre-training (JMP), a supervised pre-training strategy that simultaneously trains on multiple datasets from different chemical domains, treating each dataset as a unique pre-training task within a multi-task framework. Our combined training dataset consists of $ $120M systems from OC20, OC22, ANI-1x, and Transition-1x. We evaluate performance and generalization by fine-tuning over a diverse set of downstream tasks and datasets including: QM9, rMD17, MatBench, QMOF, SPICE, and MD22. JMP demonstrates an average improvement of 59\ Please visit for further information.

Benchmark Results

Tested on 1 dataset 1 baseline value reported too low

Tables show presented results in global context (best 3 papers + GCN + MLP).

Quantum Chemistry

#ModelMAE ↓Paper
1
QHNet
0.0000
2
QHNetV2
0.0000
3
PhiSNet
0.0000
14
Allegro
actual #14 vs paper #98 84 places worse
0.0046
best reported
actual #14 vs paper #98 84 places worse
paper 0.2000
48
MACE
actual #48 vs paper #104 56 places worse
0.3000
actual #48 vs paper #104 56 places worse
paper 0.3000
105
JMP-L
0.3000
This paper
110
JMP-S
0.7000
This paper
111
GN-OC-S
1.0000
This paper
112
GN-OC-L
1.0000
This paper
SOTA performance (not significantly different from the best) Baseline / comparison (this paper) Global context (other papers) Best at pub — reported result worse than the best known when published (best reported in green) Improved at pub — later paper surpassed this result