From Molecules to Materials: Pre-training Large Generalizable Models for Atomic Property Prediction
Abstract
Foundation models have been transformational in machine learning fields such as natural language processing and computer vision. Similar success in atomic property prediction has been limited due to the challenges of training effective models across multiple chemical domains. To address this, we introduce Joint Multi-domain Pre-training (JMP), a supervised pre-training strategy that simultaneously trains on multiple datasets from different chemical domains, treating each dataset as a unique pre-training task within a multi-task framework. Our combined training dataset consists of $ $120M systems from OC20, OC22, ANI-1x, and Transition-1x. We evaluate performance and generalization by fine-tuning over a diverse set of downstream tasks and datasets including: QM9, rMD17, MatBench, QMOF, SPICE, and MD22. JMP demonstrates an average improvement of 59\ Please visit for further information.
Benchmark Results
Tested on 1 dataset 1 baseline value reported too low
Tables show presented results in global context (best 3 papers + GCN + MLP).
Quantum Chemistry
| # | Model | MAE ↓ | Paper |
|---|---|---|---|
| 1 | QHNet | 0.0000 | |
| 2 | QHNetV2 | 0.0000 | |
| 3 | PhiSNet | 0.0000 | |
| 14 | Allegro | 0.0046 best reported | best at pub: Symmetry-Informed Geometric Representation for Molecules, Proteins, and Crystalline Materials (NeurIPS 2023) best today: FreeCG: Free the Design Space of Clebsch–Gordan Transform for Machine Learning Force Fields (ICLR 2024) |
| 48 | MACE | 0.3000 | prev best: TensorNet: Cartesian Tensor Representations for Efficient Learning of Molecular Potentials (NeurIPS 2023) best today: On the Completeness of Invariant Geometric Deep Learning Models (ICLR 2024) |
| 105 | JMP-L | 0.3000 | This paper |
| 110 | JMP-S | 0.7000 | This paper |
| 111 | GN-OC-S | 1.0000 | This paper |
| 112 | GN-OC-L | 1.0000 | This paper |
